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March 2021

How does natural selection redesign multiple interacting parts to achieve a new emergent function? Booher et al. investigated the evolution of a biomechanical innovation, the latch-spring mechanism of trap-jaw ants, to address two outstanding evolutionary problems: how form and function change in a system during the evolution of new complex traits, and whether such innovations and the diversity they beget are repeatable in time and space. Using a new phylogenetic reconstruction of 470 species, and X-ray microtomography and high-speed videography of representative taxa, they found that the trap-jaw mechanism evolved independently seven to ten times in a single ant genus (Strumigenys), resulting in the repeated evolution of diverse forms on different continents. The trap mechanism facilitates a 6 to 7 order of magnitude greater mandible acceleration relative to simpler ancestors, currently the fastest recorded acceleration of a resettable animal movement. The authors found that most morphological diversification occurred after evolution of latch-spring mechanisms, which evolved via minor realignments of mouthpart structures. The image shows the ultrafast mandible system of the trap-jaw ant Strumigenys cacaoensis rendered from an X-ray microtomography scan.

Image Credit: Julian Katzke

Essays

Rebuild the Academy: Supporting academic mothers during COVID-19 and beyond

Robinson W. Fulweiler, Sarah W. Davies, Jennifer F. Biddle, Amy J. Burgin, Emily H. G. Cooperdock, Torrance C. Hanley, Carly D. Kenkel, Amy M. Marcarelli, Catherine M. Matassa, Talea L. Mayo, Lory Z. Santiago-Vàzquez, Nikki Traylor-Knowles, Maren Ziegler

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From Reductionism to Reintegration: Solving society’s most pressing problems requires building bridges between data types across the life sciences

Anne E. Thessen, Paul Bogdan, David J. Patterson, Theresa M. Casey, César Hinojo-Hinojo, Orlando de Lange, Melissa A. Haendel

Research Articles

Intraspecific diversity loss in a predator species alters prey community structure and ecosystem functions

Allan Raffard, Julien Cucherousset, José M. Montoya, Murielle Richard, Samson Acoca-Pidolle, Camille Poésy, Alexandre Garreau, Frédéric Santoul, Simon Blanchet

Functional innovation promotes diversification of form in the evolution of an ultrafast trap-jaw mechanism in ants

Douglas B. Booher, Joshua C. Gibson, Cong Liu, John T. Longino, Brian L. Fisher, Milan Janda, Nitish Narula, Evropi Toulkeridou, Alexander S. Mikheyev, Andrew V. Suarez, Evan P. Economo

Mitotic gene conversion can be as important as meiotic conversion in driving genetic variability in plants and other species without early germline segregation

Xianqing Jia, Qijun Zhang, Mengmeng Jiang, Ju Huang, Luyao Yu, Milton Brian Traw, Dacheng Tian, Laurence D. Hurst, Sihai Yang

Bacterial defenses against a natural antibiotic promote collateral resilience to clinical antibiotics

Lucas A. Meirelles, Elena K. Perry, Megan Bergkessel, Dianne K. Newman

Natural selection in the evolution of SARS-CoV-2 in bats created a generalist virus and highly capable human pathogen

Oscar A. MacLean, Spyros Lytras, Steven Weaver, Joshua B. Singer, Maciej F. Boni, Philippe Lemey, Sergei L. Kosakovsky Pond, David L. Robertson

Blunted diurnal firing in lateral habenula projections to dorsal raphe nucleus and delayed photoentrainment in stress-susceptible mice

He Liu, Ashutosh Rastogi, Priyam Narain, Qing Xu, Merima Sabanovic, Ayesha Darwish Alhammadi, Lihua Guo, Jun-Li Cao, Hongxing Zhang, Hala Aqel, Vongai Mlambo, Rachid Rezgui, Basma Radwan, Dipesh Chaudhury

Optogenetic activation of spinal microglia triggers chronic pain in mice

Min-Hee Yi, Yong U. Liu, Anthony D. Umpierre, Tingjun Chen, Yanlu Ying, Jiaying Zheng, Aastha Dheer, Dale B. Bosco, Hailong Dong, Long-Jun Wu

CD74 is a regulator of hematopoietic stem cell maintenance

Shirly Becker-Herman, Milena Rozenberg, Carmit Hillel-Karniel, Naama Gil-Yarom, Mattias P. Kramer, Avital Barak, Lital Sever, Keren David, Lihi Radomir, Hadas Lewinsky, Michal Levi, Gilgi Friedlander, Richard Bucala, Amnon Peled, Idit Shachar

Dynamics of the cell fate specifications during female gametophyte development in Arabidopsis

Daichi Susaki, Takamasa Suzuki, Daisuke Maruyama, Minako Ueda, Tetsuya Higashiyama, Daisuke Kurihara

Sprouty2 positively regulates T cell function and airway inflammation through regulation of CSK and LCK kinases

Anand Sripada, Kapil Sirohi, Lidia Michalec, Lei Guo, Jerome T. McKay, Sangya Yadav, Mukesh Verma, James Good, Donald Rollins, Magdalena M. Gorska, Rafeul Alam

Molecular characterization of the conoid complex in Toxoplasma reveals its conservation in all apicomplexans, including Plasmodium species

Ludek Koreny, Mohammad Zeeshan, Konstantin Barylyuk, Eelco C. Tromer, Jolien J. E. van Hooff, Declan Brady, Huiling Ke, Sara Chelaghma, David J. P. Ferguson, Laura Eme, Rita Tewari, Ross F. Waller

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An evolutionarily diverged mitochondrial protein controls biofilm growth and virulence in Candida albicans

Zeinab Mamouei, Shakti Singh, Bernard Lemire, Yiyou Gu, Abdullah Alqarihi, Sunna Nabeela, Dongmei Li, Ashraf Ibrahim, Priya Uppuluri

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Single-cell longitudinal analysis of SARS-CoV-2 infection in human airway epithelium identifies target cells, alterations in gene expression, and cell state changes

Neal G. Ravindra, Mia Madel Alfajaro, Victor Gasque, Nicholas C. Huston, Han Wan, Klara Szigeti-Buck, Yuki Yasumoto, Allison M. Greaney, Victoria Habet, Ryan D. Chow, Jennifer S. Chen, Jin Wei, Renata B. Filler, Bao Wang, Guilin Wang, Laura E. Niklason, Ruth R. Montgomery, Stephanie C. Eisenbarth, Sidi Chen, Adam Williams, Akiko Iwasaki, Tamas L. Horvath, Ellen F. Foxman, Richard W. Pierce, Anna Marie Pyle, David van Dijk, Craig B. Wilen

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A quantitative model used to compare within-host SARS-CoV-2, MERS-CoV, and SARS-CoV dynamics provides insights into the pathogenesis and treatment of SARS-CoV-2

Kwang Su Kim, Keisuke Ejima, Shoya Iwanami, Yasuhisa Fujita, Hirofumi Ohashi, Yoshiki Koizumi, Yusuke Asai, Shinji Nakaoka, Koichi Watashi, Kazuyuki Aihara, Robin N. Thompson, Ruian Ke, Alan S. Perelson, Shingo Iwami

SARS-CoV-2 variants reveal features critical for replication in primary human cells

Marie O. Pohl, Idoia Busnadiego, Verena Kufner, Irina Glas, Umut Karakus, Stefan Schmutz, Maryam Zaheri, Irene Abela, Alexandra Trkola, Michael Huber, Silke Stertz, Benjamin G. Hale

Disparate temperature-dependent virus–host dynamics for SARS-CoV-2 and SARS-CoV in the human respiratory epithelium

Philip V’kovski, Mitra Gultom, Jenna N. Kelly, Silvio Steiner, Julie Russeil, Bastien Mangeat, Elisa Cora, Joern Pezoldt, Melle Holwerda, Annika Kratzel, Laura Laloli, Manon Wider, Jasmine Portmann, Thao Tran, Nadine Ebert, Hanspeter Stalder, Rune Hartmann, Vincent Gardeux, Daniel Alpern, Bart Deplancke, Volker Thiel, Ronald Dijkman

MARK2 phosphorylates eIF2α in response to proteotoxic stress

Yu-Ning Lu, Sarah Kavianpour, Tao Zhang, Xumei Zhang, Dao Nguyen, Ravi Thombre, Lu He, Jiou Wang

Loss of the abasic site sensor HMCES is synthetic lethal with the activity of the APOBEC3A cytosine deaminase in cancer cells

Josep Biayna, Isabel Garcia-Cao, Miguel M. Álvarez, Marina Salvadores, Jose Espinosa-Carrasco, Marcel McCullough, Fran Supek, Travis H. Stracker

MITOL-dependent ubiquitylation negatively regulates the entry of PolγA into mitochondria

Mansoor Hussain, Aftab Mohammed, Shabnam Saifi, Aamir Khan, Ekjot Kaur, Swati Priya, Himanshi Agarwal, Sagar Sengupta

Short Reports

Microbial colonization induces histone acetylation critical for inherited gut-germline-neural signaling

Chunlan Hong, Jonathan Lalsiamthara, Jie Ren, Yu Sang, Alejandro Aballay

Methods and Resources

Genome-wide analysis of DNA replication and DNA double-strand breaks using TrAEL-seq

Neesha Kara, Felix Krueger, Peter Rugg-Gunn, Jonathan Houseley

Meta-Research Articles

Creating clear and informative image-based figures for scientific publications

Helena Jambor, Alberto Antonietti, Bradly Alicea, Tracy L. Audisio, Susann Auer, Vivek Bhardwaj, Steven J. Burgess, Iuliia Ferling, Małgorzata Anna Gazda, Luke H. Hoeppner, Vinodh Ilangovan, Hung Lo, Mischa Olson, Salem Yousef Mohamed, Sarvenaz Sarabipour, Aalok Varma, Kaivalya Walavalkar, Erin M. Wissink, Tracey L. Weissgerber

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Assessment of transparency indicators across the biomedical literature: How open is open?

Stylianos Serghiou, Despina G. Contopoulos-Ioannidis, Kevin W. Boyack, Nico Riedel, Joshua D. Wallach, John P. A. Ioannidis

Formal Comments

Towards precision medicine in diabetes? A critical review of glucotypes

Adam Hulman, Yuri D. Foreman, Martijn C. G. J. Brouwers, Abraham A. Kroon, Koen D. Reesink, Pieter C. Dagnelie, Carla J. H. van der Kallen, Marleen M. J. van Greevenbroek, Kristine Færch, Dorte Vistisen, Marit E. Jørgensen, Coen D. A. Stehouwer, Daniel R. Witte

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